@Article{Gonnet2010, author = {Gonnet, P.}, title = {Efficient algorithms for molecular dynamics simulations on the Cell Broadband Engine Architecture}, journal = {International Conference of Numerical Analysis and Applied Mathematics}, year = {2010}, pages = {1305--1308}, doi = {10.1063/1.3497953} }, @Article{Vogel2013, year={2013}, issn={1432-9360}, journal={Computing and Visualization in Science}, volume={16}, number={4}, doi={10.1007/s00791-014-0232-9}, title={UG 4: A novel flexible software system for simulating PDE based models on high performance computers}, url={http://dx.doi.org/10.1007/s00791-014-0232-9}, publisher={Springer Berlin Heidelberg}, keywords={Simulation framework; Unstructured grids; Multigrid; Parallelization}, author={Vogel, A. and Reiter, S. and Rupp, M. and N\"agel, A. and Wittum, G.}, pages={165-179}, language={English} }, @Article{James2005, author = {Phillips, James C. and Braun, R. and Wang, W. and Tajkhorshid, E. and Villa, E. and Chipot, C. and Skeel, R. D. and Kale, L. and Schulten, K.}, title = {Scalable molecular dynamics with NAMD}, journal = {Journal of Computational Chemistry}, volume = {26}, pages = {1781--1802}, year = {2005} }